BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B05LP1|AL430174
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 1621 0.0
>3x_Contig1035
Length = 4175
Score = 1621 bits (817), Expect = 0.0
Identities = 828/831 (99%), Gaps = 1/831 (0%)
Strand = Plus / Plus
Query: 73 ggccagaagccaaacctagtaaagcccaattcttgagcatctcacaaccgatcgcacctg 132
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ggccagaagccaaacctagtaaagcc-aattcttgagcatctcacaaccgatcgcacctg 59
Query: 133 aacccactaggaataccttcaaatttgcgattctcttttggaattccaaaccgaatacgg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aacccactaggaataccttcaaatttgcgattctcttttggaattccaaaccgaatacgg 119
Query: 193 aaatttggttatcgtaacgagagttgattggtttcgtggtatctgcatttcttgggaaat 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aaatttggttatcgtaacgagagttgattggtttcgtggtatctgcatttcttgggaaat 179
Query: 253 cttcagaatctggtagagattcgatggaatcgaaatacatgtactgtttaataggagtta 312
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 180 cttcagaatctggtagagattcgatggaatcgaaatacatgtactgtttaataggagtga 239
Query: 313 acttaccggaggaggcctttaacacttcttgagcaaccagaccaccgaagaaagcaacga 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acttaccggaggaggcctttaacacttcttgagcaaccagaccaccgaagaaagcaacga 299
Query: 373 tacctggaatatcacctcttgcttggttagctagttctgtgatgagcttttcatcaactt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tacctggaatatcacctcttgcttggttagctagttctgtgatgagcttttcatcaactt 359
Query: 433 tcccctcagaacccagcacttcaggttgttgtgtagctaaatctataacgagtttaacta 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcccctcagaacccagcacttcaggttgttgtgtagctaaatctataacgagtttaacta 419
Query: 493 attcattagaatcttcttcataaaatggccttggcaattcaccttgatgtctaacttgga 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 attcattagaatcttcttcataaaatggccttggcaattcaccttgatgtctaacttgga 479
Query: 553 actgatgtagggcctggaaacccaagtgtaattgtgcagtagtctcgaatttggcgaaat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 actgatgtagggcctggaaacccaagtgtaattgtgcagtagtctcgaatttggcgaaat 539
Query: 613 ccgagtacaggaactctggtgttgccaaagattcccttaaagacttgaacgttaatttct 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ccgagtacaggaactctggtgttgccaaagattcccttaaagacttgaacgttaatttct 599
Query: 673 gtggcatcttgacctcggtgaacagaccacctttcttgtatgtwccaagatccttaacag 732
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 600 gtggcatcttgacctcggtgaacagaccacctttcttgtatgtaccaagatccttaacag 659
Query: 733 aaccaatcttgaatgcgaacggacccaacacctcgaccttgtaaggagtaccatcattca 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaccaatcttgaatgcgaacggacccaacacctcgaccttgtaaggagtaccatcattca 719
Query: 793 acttctcaagaccttccacctcggagaatttgacgtaattgccatcttctaacccatgtc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 acttctcaagaccttccacctcggagaatttgacgtaattgccatcttctaacccatgtc 779
Query: 853 tgttatcgtccaacatggtcactgtaccatccgactcgatatcagaaacaa 903
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgttatcgtccaacatggtcactgtaccatccgactcgatatcagaaacaa 830
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6090
Number of Sequences: 1807
Number of extensions: 6090
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)